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bash_profile (heron) - v1.6 - Modify lib path due to bug on server
Fred authored on19/10/2014 00:48:41 Showing1 changed files
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@@ -68,7 +68,7 @@ export PATH=$PATH:/opt/openmpi/bin:/opt/bio/ncbi/bin:/opt/bio/mpiblast/bin:/opt/ |
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export PATH=$PATH:/opt/gridengine/bin/linux-x64 # System path needed for the new medusa |
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# Location of bamtools lib (source: http://www.vcru.wisc.edu/simonlab/bioinformatics/programs/install/bamtools.htm) |
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-export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:$HOME/local/lib:$HOME/local/lib64" #:$LD_LIBRARY_PATH" |
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+export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:$HOME/local/lib" #:$HOME/local/lib64" #Otherwise pb with heron #:$LD_LIBRARY_PATH" |
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# Perl variables |
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export PERL5LIB=~/local/lib/perl5/site_perl/5.18.2/x86_64-linux/auto:~/local/lib/perl5/5.18.2:~/local/lib/perl5/site_perl:~/local/lib/perl5/site_perl/5.18.2:~/local/lib/perl5/site_perl/5.18.2/x86_64-linux:~/local/lib/perl5/5.18.2/x86_64-linux:/usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi:/usr/lib/perl5/site_perl/5.8.8:/usr/lib/perl5/site_perl:/usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi:/usr/lib/perl5/vendor_perl/5.8.8:/usr/lib/perl5/vendor_perl:/usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi:/usr/lib/perl5/5.8.8 |